Selected Publications

  1. Kenne, G. J., Gummadidala, P. M., Omebeyinje, M. H., Mandal, A. M., *Bett, D. K., McFadden, S., Bromfield, S., Banaszek, N., Velez-Martinez, M., Mitra, C., Mikell, I., Chatterjee, S., Wee, J., and Chanda, A., “Activation of aflatoxin biosynthesis alleviates total ROS in Aspergillus parasiticus,” Toxins 2018, 10, 57. doi: 10.3390/toxins10020057. (Outcome of a collaborative research between Dr. Mondal’s research group at Claflin University and Dr. Chanda’s research group at the University of South Carolina). *Undergraduate student.
  2. *Bett, D. K. and Mondal, A. M., “Diffusion Kernel to Identify Missing PPIs in Protein Network Biomarker,” Proceedings, 8th International Workshop on Biomolecular Interaction Network Analysis and Interactomics (IWBNA) in conjunction with IEEE International Conference on Bioinformatics and Biomedicine, BIBM-2015, p. 1614-1619(2015). *Undergraduate student.
  3. *Timalsina, P., *Charles, K., and Mondal, A. M., “STRING PPI Score to Characterize Protein Subnetwork Biomarkers for Human Diseases and Pathways,” Proceedings, 14th IEEE International Conference on Bioinformatics and Bioengineering, BIBE-2014, p. 251-156 (2014). *Undergraduate student.
  4. Mondal, A. M. and Hu, J., “Network Based Prediction of Protein Localization Using Diffusion Kernel”, International Journal of Data Mining and Bioinformatics (IJDMB), Vol. 9, p. 386-395(2014).
  5. *Charles, K., *Afful, A., and Mondal, A. M., “Protein Subnetwork Biomarkers for Yeast Using Brute Force Method”, Proceedings, The 2013 International Conference on Bioinformatics & Computational Biology, BIOCOMP’13, p. 218 – 223(2013). *Undergraduate student.
  6. Mondal, A. M. and Hu, J., “Scored Protein-Protein Interaction to Predict Subcellular Localizations for Yeast Using Diffusion Kernel,” Pattern Recognition and Machine Intelligence, Lecture Notes in Computer Science (LNCS), Vol. 8251, p. 647-655(2013).
  7. Mondal, A. M. and Hu, J., “Mutation Analysis of Disease Causing Proteins”, Proceedings, IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW, p. 975-977 (2012).
  8. Mondal, A. M. and Hu, J., “Protein Localization by Integrating Multiple Protein Correlation Networks”, Proceedings, The 2012 International Conference on Bioinformatics & Computational Biology, BIOCOMP’12, p. 82 – 88(2012).
  9. Lin JR, Mondal, A. M., Liu, R., and Hu, J., “Minimalist Ensemble Algorithms for Genome-wide Protein Localization Prediction”, BMC Bioinformatics, 13:157 (2012).
  10. Mondal, A. M., Lin, JR and Hu, J., “Network Based Subcellular Localization Prediction for Multi-Label Proteins”, Proceedings, IEEE International Conference on Bioinformatics and Biomedicine Workshops, BIBMW, p. 473-480 (2011).
  11. Mondal, A. M. and Hu, J., “NetLoc: Network based protein localization prediction using protein-protein interaction and co-expression networks”, Proceedings, IEEE International Conference on Bioinformatics and Biomedicine, BIBM2010, p. 142-148 (2010).